Sobic.003G015700.1

Description : class-C endo-1,4-beta-glucanase

Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.003G015700.1
Cluster	HCAA Clusters: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g54580	No alias	cellulase 2	0.03	Orthogroups_2024-Update
Bradi3g57190	No alias	glycosyl hydrolase 9A4	0.02	Orthogroups_2024-Update
Glyma.06G008200	No alias	glycosyl hydrolase 9B18	0.03	Orthogroups_2024-Update
HORVU6Hr1G022270.6	No alias	Unknown function	0.03	Orthogroups_2024-Update
Pp1s100_137V6	No alias	endo- -beta-	0.02	Orthogroups_2024-Update
Seita.2G284400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0030246	carbohydrate binding	IEA	16Dec
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001701	Glyco_hydro_9	46	511
IPR019028	CBM_49	561	639

External Links

No external refs found!