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  5. Sobic.003G015900.1

Sobic.003G015900.1


Description : component *(CWC15) of MAC spliceosome-associated complex


Gene families : OG_42_0004170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G015900.1
Cluster HCAA Clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G062076 No alias Cwf15 / Cwc15 cell cycle control family protein 0.03 Orthogroups_2024-Update
Kfl00286_0180 kfl00286_0180_v1.1 (at3g13200 : 113.0) EMBRYO DEFECTIVE 2769 (EMB2769);... 0.02 Orthogroups_2024-Update
Seita.4G004800.1 No alias component *(CWC15) of MAC spliceosome-associated complex 0.03 Orthogroups_2024-Update
evm.model.tig00021281.10 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA 16Dec
CC GO:0005681 spliceosomal complex IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006973 Cwf_Cwc_15 1 231
No external refs found!