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  5. Sobic.003G017200.1

Sobic.003G017200.1


Description : effector protein *(TFL/BFT/CEN) & florigen component *(FT)


Gene families : OG_42_0000178 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000178_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G017200.1
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
At1g18100 No alias Protein MOTHER of FT and TFL1... 0.05 Orthogroups_2024-Update
Brara.B00114.1 No alias effector protein *(TFL/BFT/CEN) 0.03 Orthogroups_2024-Update
GRMZM2G152689 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.05 Orthogroups_2024-Update
GRMZM2G338454 No alias centroradialis 0.03 Orthogroups_2024-Update
Glyma.18G298900 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G072750.4 No alias effector protein *(TFL/BFT/CEN) 0.04 Orthogroups_2024-Update
HORVU3Hr1G087100.1 No alias effector protein *(TFL/BFT/CEN) & florigen component *(FT) 0.03 Orthogroups_2024-Update
HORVU7Hr1G024610.1 No alias effector protein *(TFL/BFT/CEN) & florigen component *(FT) 0.03 Orthogroups_2024-Update
LOC_Os05g44180 No alias osFTL10 FT-Like10 homologous to Flowering Locus T ... 0.03 Orthogroups_2024-Update
Seita.4G067600.1 No alias effector protein *(TFL/BFT/CEN) & florigen component *(FT) 0.03 Orthogroups_2024-Update
Seita.7G069000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G038400.1 No alias effector protein *(TFL/BFT/CEN) 0.03 Orthogroups_2024-Update
Solyc03g063100 No alias single flower truss 0.03 Orthogroups_2024-Update
Solyc11g008640 No alias Flowering locus T (AHRD V3.3 *** D5LM18_PETHY) 0.04 Orthogroups_2024-Update
Sopen05g034090 No alias Phosphatidylethanolamine-binding protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR008914 PEBP 50 159
No external refs found!