1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G018400.1

Sobic.003G018400.1


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G018400.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
At1g72310 No alias RING-H2 finger protein ATL3... 0.03 Orthogroups_2024-Update
At4g15975 No alias RING/U-box superfamily protein [Source:TAIR;Acc:AT4G15975] 0.03 Orthogroups_2024-Update
Bradi3g51600 No alias TOXICOS EN LEVADURA 2 0.05 Orthogroups_2024-Update
Brara.F02863.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G01979.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G004480 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G232800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G292600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G011010.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp8g15250.1 No alias RING-H2-class E3 ligase 0.01 Orthogroups_2024-Update
PSME_00057213-RA No alias (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
Potri.009G110000 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Sobic.004G057000.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.006G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.006G248801.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.08 Orthogroups_2024-Update
Solyc09g075320 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT4G15975.1) 0.03 Orthogroups_2024-Update
Solyc11g066510 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) 0.03 Orthogroups_2024-Update
Sopen01g035300 No alias Ring finger domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 106 149
No external refs found!