1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G021500.1

Sobic.003G021500.1


Description : cation exchanger *(NCL/EF-CAX)


Gene families : OG_42_0001514 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G021500.1
Cluster HCAA Clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
A4A49_37019 No alias hypothetical protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G037600.1 No alias cation exchanger *(NCL/EF-CAX) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 81 257
IPR004837 NaCa_Exmemb 421 565
IPR002048 EF_hand_dom 299 366
No external refs found!