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  5. Sobic.003G028000.1

Sobic.003G028000.1


Description : subgroup ERF-III transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G028000.1
Cluster HCAA Clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
104980 No alias related to AP2 4 0.03 Orthogroups_2024-Update
At1g53170 No alias Ethylene-responsive transcription factor 8... 0.03 Orthogroups_2024-Update
Bradi2g60340 No alias C-repeat/DRE binding factor 2 0.03 Orthogroups_2024-Update
Brara.A01384.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.04 Orthogroups_2024-Update
Brara.H02645.1 No alias subgroup ERF-III transcription factor 0.04 Orthogroups_2024-Update
Glyma.04G067200 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Glyma.11G239200 No alias related to AP2 4 0.04 Orthogroups_2024-Update
HORVU5Hr1G080790.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
LOC_Os07g22730 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.006G080300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s112_23V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s132_34V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s204_42V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s21_214V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s480_12V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.1G271000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G230500.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Seita.3G291500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G109400.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G378900.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G428700.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 56 106
No external refs found!