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  5. Sobic.003G033500.1

Sobic.003G033500.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G033500.1
Cluster HCAA Clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
A4A49_16781 No alias dof zinc finger protein dof4.6 0.03 Orthogroups_2024-Update
A4A49_35213 No alias dof zinc finger protein dof1.7 0.02 Orthogroups_2024-Update
At2g28510 No alias Dof zinc finger protein DOF2.1... 0.02 Orthogroups_2024-Update
At4g38000 No alias DOF4.7 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K8] 0.03 Orthogroups_2024-Update
At5g60850 No alias OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84] 0.03 Orthogroups_2024-Update
Brara.H01664.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.I00633.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.I02955.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Glyma.19G023200 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Glyma.20G216600 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G013890.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os02g45200 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_123810g0010 No alias (at5g60850 : 129.0) Encodes a zinc finger protein.; OBF... 0.03 Orthogroups_2024-Update
MA_18267g0010 No alias (at5g62940 : 141.0) HCA2 induces the formation of... 0.02 Orthogroups_2024-Update
Potri.011G054300 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Potri.019G040700 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Pp1s1_286V6 No alias dof domain zinc finger dna-binding protein 0.02 Orthogroups_2024-Update
Pp1s26_282V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s385_53V6 No alias ascorbate oxidase promoter-binding protein aobp 0.02 Orthogroups_2024-Update
Seita.3G371900.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Sobic.001G420300.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.003G301700.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc02g090220 No alias Zinc finger, Dof-type (AHRD V3.3 *** A0A124SC40_CYNCS) 0.01 Orthogroups_2024-Update
Solyc03g121400 No alias Dof zinc finger protein14 0.02 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 36 88
No external refs found!