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  5. Sobic.003G033900.1

Sobic.003G033900.1


Description : EC_4.4 carbon-sulfur lyase & 1-aminocyclopropane-1-carboxylate (ACC) synthase


Gene families : OG_42_0000419 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G033900.1
Cluster HCAA Clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
A4A49_18413 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
A4A49_57945 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
GRMZM2G018006 No alias 1-amino-cyclopropane-1-carboxylate synthase 12 0.02 Orthogroups_2024-Update
Glyma.01G196100 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.02 Orthogroups_2024-Update
Glyma.05G211700 No alias ACC synthase 1 0.03 Orthogroups_2024-Update
Glyma.08G018000 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.02 Orthogroups_2024-Update
LOC_Os01g09700 No alias aminotransferase, classes I and II, domain containing... 0.03 Orthogroups_2024-Update
PSME_00017640-RA No alias (at4g26200 : 550.0) Member of a family of proteins in... 0.02 Orthogroups_2024-Update
Sobic.010G020800.1 No alias EC_4.4 carbon-sulfur lyase 0.02 Orthogroups_2024-Update
Solyc02g063540 No alias 1-aminocyclopropane-1-carboxylate synthase 7 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0030170 pyridoxal phosphate binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
MF GO:0050525 cutinase activity IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 60 442
No external refs found!