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  5. Sobic.003G037300.1

Sobic.003G037300.1


Description : UV-A/blue light photoreceptor *(PLP)


Gene families : OG_42_0004388 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004388_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G037300.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
A4A49_07422 No alias protein twin lov 1 0.04 Orthogroups_2024-Update
Bradi2g05520 No alias PAS/LOV protein B 0.02 Orthogroups_2024-Update
Glyma.01G042300 No alias PAS/LOV protein B 0.02 Orthogroups_2024-Update
Pp1s199_143V6 No alias blue light receptor 0.02 Orthogroups_2024-Update
Sopen01g006090 No alias PAS domain 0.03 Orthogroups_2024-Update
Sopen05g002980 No alias PAS domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000014 PAS 267 360
IPR000014 PAS 49 140
No external refs found!