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  5. Sobic.003G042200.2

Sobic.003G042200.2


Description : LRR-domain extensin


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G042200.2
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_26804 No alias pollen-specific leucine-rich repeat extensin-like protein 1 0.04 Orthogroups_2024-Update
At2g19780 No alias Leucine-rich repeat (LRR) family protein... 0.03 Orthogroups_2024-Update
Brara.C03718.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
GRMZM2G341410 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G019290.2 No alias LRR-domain extensin 0.04 Orthogroups_2024-Update
LOC_Os01g08470 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
MA_100985g0010 No alias (at4g13340 : 496.0) Leucine-rich repeat (LRR) family... 0.04 Orthogroups_2024-Update
MA_7188g0010 No alias (at4g18670 : 352.0) Leucine-rich repeat (LRR) family... 0.03 Orthogroups_2024-Update
Potri.004G146400 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Potri.006G152800 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Potri.009G108100 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Seita.1G092900.1 No alias LRR-domain extensin 0.05 Orthogroups_2024-Update
Sobic.002G050900.2 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 127 185
No external refs found!