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  5. Sobic.003G045200.1

Sobic.003G045200.1


Description : reader component *(TDRD3) of TDRD3-TOP3B methyl-arginine reader complex


Gene families : OG_42_0007521 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007521_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G045200.1
Cluster HCAA Clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
At5g19950 No alias AT5G19950 protein [Source:UniProtKB/TrEMBL;Acc:Q8L502] 0.03 Orthogroups_2024-Update
Bradi2g04870 No alias Domain of unknown function (DUF1767) 0.04 Orthogroups_2024-Update
MA_70394g0010 No alias (at5g19950 : 80.1) CONTAINS InterPro DOMAIN/s: Domain of... 0.05 Orthogroups_2024-Update
Seita.5G125900.1 No alias reader component *(TDRD3) of TDRD3-TOP3B methyl-arginine... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013894 RMI1_N 111 186
No external refs found!