1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G046200.2

Sobic.003G046200.2


Description : Unknown function


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G046200.2
Cluster HCAA Clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Brara.B00372.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G444560 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
HORVU5Hr1G026270.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G066780.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G124260.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G098210.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g19260 No alias ATPase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g27340 No alias ATPase, putative, expressed 0.02 Orthogroups_2024-Update
MA_230170g0010 No alias (at3g28580 : 223.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
PSME_00011756-RA No alias (at4g30250 : 363.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
Potri.008G177200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Pp1s325_27V6 No alias atp binding 0.02 Orthogroups_2024-Update
Seita.9G050000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G247300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g079630 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 270 399
IPR025753 AAA_N_dom 44 144
No external refs found!