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  5. Sobic.003G048000.1

Sobic.003G048000.1


Description : Unknown function


Gene families : OG_42_0002940 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002940_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G048000.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G010500 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU3Hr1G023750.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_137804g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s152_163V6 No alias F14G24.13; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sopen03g033160 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0000278 mitotic cell cycle IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!