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  5. Sobic.003G059100.2

Sobic.003G059100.2


Description : Unknown function


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G059100.2
Cluster HCAA Clusters: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
A4A49_08665 No alias receptor-like protein 12 0.03 Orthogroups_2024-Update
At1g45616 No alias Receptor-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C637] 0.04 Orthogroups_2024-Update
Bradi2g02160 No alias receptor like protein 33 0.02 Orthogroups_2024-Update
Bradi2g03853 No alias receptor like protein 6 0.02 Orthogroups_2024-Update
Bradi2g03856 No alias receptor like protein 7 0.02 Orthogroups_2024-Update
Bradi2g61458 No alias receptor like protein 34 0.08 Orthogroups_2024-Update
Brara.A02063.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G00307.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J00325.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G002818 No alias Leucine-rich repeat transmembrane protein kinase 0.09 Orthogroups_2024-Update
GRMZM2G174128 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Glyma.14G043100 No alias receptor like protein 6 0.02 Orthogroups_2024-Update
Glyma.14G043300 No alias receptor like protein 33 0.02 Orthogroups_2024-Update
LOC_Os01g06730 No alias verticillium wilt disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g06920 No alias resistance protein SlVe1 precursor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g40440 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.001G437700 No alias receptor like protein 7 0.02 Orthogroups_2024-Update
Potri.011G021332 No alias receptor like protein 7 0.02 Orthogroups_2024-Update
Potri.012G005700 No alias receptor like protein 27 0.04 Orthogroups_2024-Update
Potri.012G009566 No alias receptor like protein 34 0.02 Orthogroups_2024-Update
Seita.5G113800.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Solyc01g005870 No alias Leucine-rich repeat receptor-like protein kinase family... 0.04 Orthogroups_2024-Update
Solyc12g006020 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g009520 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g009690 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.04 Orthogroups_2024-Update
Solyc12g009740 No alias Leucine-rich repeat receptor-like protein kinase family... 0.04 Orthogroups_2024-Update
Solyc12g049190 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Solyc12g099980 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Solyc12g100030 No alias LOW QUALITY:Leucine-rich-repeat receptor-like protein... 0.03 Orthogroups_2024-Update
Sopen01g001770 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update
Sopen03g006290 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update
Sopen06g003150 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 368 427
IPR001611 Leu-rich_rpt 294 353
IPR001611 Leu-rich_rpt 101 160
IPR001611 Leu-rich_rpt 622 680
IPR001611 Leu-rich_rpt 814 830
No external refs found!