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  5. Sobic.003G064400.1

Sobic.003G064400.1


Description : RNA splicing factor *(RSZ32/33)


Gene families : OG_42_0002115 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G064400.1
Cluster HCAA Clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Sobic.009G022100.1 No alias RNA splicing factor *(RSZ32/33) 0.08 Orthogroups_2024-Update
Solyc05g054920 No alias Serine/arginine-rich-splicing factor RS2Z32 (AHRD V3.3... 0.02 Orthogroups_2024-Update
evm.model.tig00021531.8 No alias (at2g37340 : 155.0) encodes an RS-containing Zinc... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 138 153
IPR001878 Znf_CCHC 116 131
IPR000504 RRM_dom 26 87
No external refs found!