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  5. Sobic.003G076600.1

Sobic.003G076600.1


Description : MYB-RELATED transcription factor *(MYB-R-R)


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G076600.1
Cluster HCAA Clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
130556 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
133546 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
84280 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_36597 No alias transcription factor myb1r1 0.02 Orthogroups_2024-Update
At2g38090 No alias Duplicated homeodomain-like superfamily protein... 0.03 Orthogroups_2024-Update
At5g58900 No alias Homeodomain-like transcriptional regulator... 0.04 Orthogroups_2024-Update
Bradi2g02810 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g42870 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.B02978.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.C01919.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Brara.C04277.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.F00380.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Brara.J02638.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Glyma.01G112700 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G078000 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G176500 No alias Homeodomain-like transcriptional regulator 0.03 Orthogroups_2024-Update
Glyma.11G227200 No alias Duplicated homeodomain-like superfamily protein 0.06 Orthogroups_2024-Update
Glyma.14G191700 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G094400 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os05g37050 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g04840 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_40234g0010 No alias (at5g47390 : 218.0) myb-like transcription factor family... 0.02 Orthogroups_2024-Update
Mp2g13020.1 No alias transcription factor (MYB-related) 0.01 Orthogroups_2024-Update
Mp4g22430.1 No alias transcription factor (MYB-related) 0.02 Orthogroups_2024-Update
Mp5g11830.1 No alias transcription factor (MYB-related) 0.01 Orthogroups_2024-Update
PSME_00003776-RA No alias (at5g47390 : 201.0) myb-like transcription factor family... 0.05 Orthogroups_2024-Update
PSME_00026612-RA No alias (at5g47390 : 221.0) myb-like transcription factor family... 0.04 Orthogroups_2024-Update
PSME_00051540-RA No alias (at5g47390 : 215.0) myb-like transcription factor family... 0.02 Orthogroups_2024-Update
Potri.003G049100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G076200 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.012G073900 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s89_108V6 No alias dna binding 0.04 Orthogroups_2024-Update
Seita.9G319600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sopen05g033680 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen07g014330 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen12g003730 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009411 response to UV IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 36 81
No external refs found!