1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G082100.1

Sobic.003G082100.1


Description : class-C-I small heat-shock-responsive protein


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G082100.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
At1g53540 No alias 17.6 kDa class I heat shock protein 3... 0.02 Orthogroups_2024-Update
At5g59720 No alias 18.1 kDa class I heat shock protein... 0.02 Orthogroups_2024-Update
Bradi1g53850 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g05374 No alias 17.6 kDa class II heat shock protein 0.04 Orthogroups_2024-Update
Bradi4g21070 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Brara.D01770.1 No alias class-C-I small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
Glyma.07G043600 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G068700 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G176400 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G175700 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G099900 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
Glyma.14G214800 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G206200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G011400 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G006940.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G007380.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G020520.6 No alias class-C-II small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
LOC_Os01g04340 No alias hsp20/alpha crystallin family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g54140 No alias hsp20/alpha crystallin family protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_103104g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10426614g0010 No alias (at5g59720 : 200.0) encodes a low molecular weight heat... 0.03 Orthogroups_2024-Update
MA_24774g0010 No alias (at5g59720 : 211.0) encodes a low molecular weight heat... 0.03 Orthogroups_2024-Update
MA_52700g0010 No alias (p31673|hsp21_orysa : 159.0) 17.4 kDa class I heat shock... 0.03 Orthogroups_2024-Update
PSME_00008030-RA No alias (at5g12030 : 128.0) Encodes a cytosolic small heat shock... 0.03 Orthogroups_2024-Update
PSME_00016778-RA No alias (p12810|hsp11_wheat : 140.0) 16.9 kDa class I heat shock... 0.03 Orthogroups_2024-Update
Potri.008G062300 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G049800 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Potri.009G147900 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G175200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G130700 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Pp1s350_28V6 No alias contains EST AU093701(C63333) [Oryza sativa (japonica... 0.02 Orthogroups_2024-Update
Pp1s77_290V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.5G092900.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.002G319100.1 No alias class-C-V small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.003G082200.1 No alias class-C-I small heat-shock-responsive protein 0.05 Orthogroups_2024-Update
Sobic.003G082500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G026300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g102960 No alias Heat-shock protein, putative (AHRD V3.3 *** B9S5K5_RICCO) 0.02 Orthogroups_2024-Update
Solyc11g020330 No alias leer-sHSP small heat shock protein 0.02 Orthogroups_2024-Update
Solyc12g042830 No alias Small heat-shock protein, putative (AHRD V3.3 *** B9RV59_RICCO) 0.03 Orthogroups_2024-Update
Sopen01g045370 No alias Hsp20/alpha crystallin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 48 151
No external refs found!