Sobic.003G082200.1


Description : class-C-I small heat-shock-responsive protein


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G082200.1
Cluster HCAA Clusters: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
At1g53540 No alias 17.6 kDa class I heat shock protein 3... 0.03 Orthogroups_2024-Update
At5g12020 No alias 17.6 kDa class II heat shock protein... 0.02 Orthogroups_2024-Update
Bradi4g21070 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Brara.H01093.1 No alias class-C-V small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Brara.J01342.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Brara.J02182.1 No alias class-C-II small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G015130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Mp7g02080.1 No alias 17.6 kDa class I heat shock protein 3 OS=Arabidopsis... 0.01 Orthogroups_2024-Update
Mp7g07890.1 No alias 18.5 kDa class I heat shock protein OS=Glycine max... 0.01 Orthogroups_2024-Update
PSME_00006740-RA No alias (at3g51680 : 165.0) NAD(P)-binding Rossmann-fold... 0.01 Orthogroups_2024-Update
Potri.003G071100 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G062300 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G001600 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G130700 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Pp1s129_85V6 No alias 18.1 kDa class I heat shock protein (HSP 18.1) [Pisum sativum] 0.02 Orthogroups_2024-Update
Pp1s350_28V6 No alias contains EST AU093701(C63333) [Oryza sativa (japonica... 0.02 Orthogroups_2024-Update
Pp1s77_290V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s8_86V6 No alias 17.4 kDa class I heat shock protein (HSP 17.4)... 0.02 Orthogroups_2024-Update
Seita.5G092700.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.003G039400.1 No alias class-C-II small heat-shock-responsive protein 0.05 Orthogroups_2024-Update
Sobic.003G082100.1 No alias class-C-I small heat-shock-responsive protein 0.05 Orthogroups_2024-Update
Sobic.004G321000.1 No alias class-C-III small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
Sobic.005G086400.1 No alias class-ER small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Sobic.010G104300.1 No alias class-PX small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
Solyc01g102960 No alias Heat-shock protein, putative (AHRD V3.3 *** B9S5K5_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 46 148
No external refs found!