1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At3g50070

At3g50070


Description : CYCD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VE15]


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g50070
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
412774 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
A4A49_04871 No alias cyclin-d3-2 0.03 Orthogroups_2024-Update
A4A49_22020 No alias cyclin-d3-1 0.03 Orthogroups_2024-Update
A4A49_35820 No alias cyclin-d3-1 0.03 Orthogroups_2024-Update
Bradi4g32556 No alias CYCLIN D4;1 0.03 Orthogroups_2024-Update
Brara.C00056.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Brara.F02409.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Glyma.06G094600 No alias CYCLIN D4;1 0.03 Orthogroups_2024-Update
Glyma.12G199300 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
Glyma.20G126700 No alias CYCLIN D3;1 0.03 Orthogroups_2024-Update
HORVU2Hr1G030170.1 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_17738g0010 No alias (at3g50070 : 241.0) Encode CYCD3;3, a CYCD3 D-type... 0.03 Orthogroups_2024-Update
MA_94639g0010 No alias (at1g70210 : 160.0) Encodes a D-type cyclin that... 0.03 Orthogroups_2024-Update
PSME_00001479-RA No alias (at4g34160 : 239.0) encodes a cyclin D-type protein... 0.03 Orthogroups_2024-Update
Potri.011G040900 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
Seita.3G370300.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Sobic.002G190700.2 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Sobic.005G231400.2 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Solyc05g006050 No alias cyclinD1_1 0.04 Orthogroups_2024-Update
Sopen01g010480 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 84 185
IPR004367 Cyclin_C-dom 188 297
No external refs found!