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  5. Sobic.003G087200.1

Sobic.003G087200.1


Description : EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO)


Gene families : OG_42_0001102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G087200.1
Cluster HCAA Clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Brara.I05177.1 No alias EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO) 0.03 Orthogroups_2024-Update
PSME_00032243-RA No alias (at1g11190 : 140.0) Encodes a bifunctional nuclease that... 0.03 Orthogroups_2024-Update
Pp1s211_122V6 No alias bifunctional nuclease 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0004519 endonuclease activity IEA 16Dec
BP GO:0006308 DNA catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003154 S1/P1nuclease 30 289
No external refs found!