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  5. Sobic.003G099300.1

Sobic.003G099300.1


Description : Unknown function


Gene families : OG_42_0002078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G099300.1
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g02090 No alias expressed protein 0.02 Orthogroups_2024-Update
PSME_00002437-RA No alias (at1g26110 : 322.0) Encodes Decapping 5, required for... 0.03 Orthogroups_2024-Update
Potri.017G111500 No alias decapping 5 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
CC GO:0072546 ER membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019050 FDF_dom 497 595
IPR025609 Lsm14-like_N 39 112
No external refs found!