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  5. Sobic.003G100000.1

Sobic.003G100000.1


Description : beta-glucosidase involved in pollen intine formation & EC_3.2 glycosylase


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G100000.1

Target Alias Description ECC score Gene Family Method Actions
Glyma.12G054000 No alias beta glucosidase 17 0.05 Orthogroups_2024-Update
HORVU0Hr1G020750.15 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os03g49610 No alias Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high... 0.03 Orthogroups_2024-Update
LOC_Os09g31430 No alias Os9bglu30 - beta-glucosidase, similar to Os4bglu12... 0.02 Orthogroups_2024-Update
MA_356467g0010 No alias (at1g26560 : 525.0) beta glucosidase 40 (BGLU40);... 0.02 Orthogroups_2024-Update
Potri.001G225900 No alias beta glucosidase 16 0.03 Orthogroups_2024-Update
Seita.3G270000.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.006G117400.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sobic.006G146100.1 No alias coniferin beta-glucosidase & EC_3.2 glycosylase 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 55 517
No external refs found!