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  5. Sobic.003G100500.2

Sobic.003G100500.2


Description : Unknown function


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G100500.2
Cluster HCAA Clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Bradi1g31971 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
Bradi1g44425 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Bradi2g42820 No alias disease resistance family protein / LRR family protein 0.06 Orthogroups_2024-Update
Bradi3g05292 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Bradi3g41810 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
Bradi3g51110 No alias disease resistance family protein / LRR family protein 0.05 Orthogroups_2024-Update
Bradi4g13600 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Bradi4g16183 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Bradi5g25030 No alias disease resistance family protein / LRR family protein 0.05 Orthogroups_2024-Update
GRMZM2G083797 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Glyma.10G129000 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G039010.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G004130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G009100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G001170.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g41750 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os01g41780 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os06g04830 No alias leucine rich repeat protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g35790 No alias Leucine rich repeat N-terminal domain containing... 0.03 Orthogroups_2024-Update
LOC_Os11g36020 No alias leucine rich repeat protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_19613g0010 No alias (at2g34930 : 394.0) disease resistance family protein /... 0.04 Orthogroups_2024-Update
Seita.2G010100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G215800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.6G230900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G048200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G237800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G130700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc07g008620 No alias EIX receptor 1 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 248 308
IPR001611 Leu-rich_rpt 623 681
IPR001611 Leu-rich_rpt 447 464
IPR001611 Leu-rich_rpt 394 415
IPR001611 Leu-rich_rpt 13 26
No external refs found!