Sobic.003G102200.1


Description : Unknown function


Gene families : OG_42_0000435 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G102200.1
Cluster HCAA Clusters: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
A4A49_00190 No alias hypothetical protein 0.01 Orthogroups_2024-Update
A4A49_34023 No alias hypothetical protein 0.02 Orthogroups_2024-Update
A4A49_39401 No alias transcription factor bhlh55 0.02 Orthogroups_2024-Update
At1g10585 No alias Transcription factor bHLH167... 0.03 Orthogroups_2024-Update
Brara.H01580.1 No alias bHLH-type transcription factor 0.01 Orthogroups_2024-Update
Brara.I05216.1 No alias bHLH-type transcription factor 0.11 Orthogroups_2024-Update
Brara.K00200.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.05G036800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G291900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G149900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G150000 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G114300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G205200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G075000 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G000180.3 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g01870 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.01 Orthogroups_2024-Update
MA_290659g0010 No alias (at5g51790 : 84.0) basic helix-loop-helix (bHLH)... 0.01 Orthogroups_2024-Update
PSME_00017592-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00019999-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00020000-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00029446-RA No alias (at1g12540 : 86.7) basic helix-loop-helix (bHLH)... 0.01 Orthogroups_2024-Update
PSME_00040197-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00052913-RA No alias (at4g25400 : 80.9) basic helix-loop-helix (bHLH)... 0.01 Orthogroups_2024-Update
Potri.001G113400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Potri.012G132000 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G134300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Potri.015G134400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Seita.5G073000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g114230 No alias bHLH transcription factor 082 0.01 Orthogroups_2024-Update
Solyc09g074810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily... 0.01 Orthogroups_2024-Update
Solyc10g008260 No alias bHLH transcription factor 093 0.01 Orthogroups_2024-Update
Sopen03g033330 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 36 101
No external refs found!