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  5. Sobic.003G107300.1

Sobic.003G107300.1


Description : regulatory protein *(LIR1) of ferredoxin-NADP oxidoreductase activity


Gene families : OG_42_0007858 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G107300.1
Cluster HCAA Clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Glyma.19G102400 No alias CCR-like 0.03 Orthogroups_2024-Update
Seita.5G067800.1 No alias regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
InterPro domains Description Start Stop
IPR009856 Lir1 1 127
No external refs found!