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  5. Sobic.003G111500.1

Sobic.003G111500.1


Description : isoprenyl diphosphate synthase *(IDS) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group


Gene families : OG_42_0001166 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G111500.1
Cluster HCAA Clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
At3g32040 No alias Geranylgeranyl pyrophosphate synthase 12, chloroplastic... 0.03 Orthogroups_2024-Update
Brara.I01092.1 No alias isoprenyl diphosphate synthase *(IDS) & EC_2.5... 0.03 Orthogroups_2024-Update
GRMZM2G058404 No alias geranylgeranyl pyrophosphate synthase 1 0.03 Orthogroups_2024-Update
PSME_00056203-RA No alias (q43133|ggpps_sinal : 412.0) Geranylgeranyl... 0.03 Orthogroups_2024-Update
Potri.004G090600 No alias geranylgeranyl pyrophosphate synthase 1 0.03 Orthogroups_2024-Update
Potri.017G124600 No alias geranylgeranyl pyrophosphate synthase 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 96 337
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