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  5. At3g50410

At3g50410


Description : OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5]


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g50410
Cluster HCCA clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Bradi1g15420 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Bradi1g17410 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Brara.A01411.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.F02426.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G042218 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
GRMZM2G134545 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
GRMZM2G179069 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.05 Orthogroups_2024-Update
Glyma.13G237500 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.16G145000 No alias OBF binding protein 1 0.03 Orthogroups_2024-Update
Glyma.17G081800 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Glyma.20G216600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G005390.2 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU4Hr1G074990.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU5Hr1G113190.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
PSME_00052342-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
PSME_00056872-RA No alias (at5g60200 : 116.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
Potri.004G046600 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.008G087800 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Potri.016G069300 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.001G034300.3 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.002G421900.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.004G266200.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.02 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 28 84
No external refs found!