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At3g50420


Description : Pentatricopeptide repeat-containing protein At3g50420 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCT2]


Gene families : OG_42_0003994 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003994_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g50420
Cluster HCCA clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Seita.5G358700.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 264 312
IPR002885 Pentatricopeptide_repeat 567 615
IPR002885 Pentatricopeptide_repeat 641 663
IPR002885 Pentatricopeptide_repeat 136 162
IPR002885 Pentatricopeptide_repeat 26 53
IPR002885 Pentatricopeptide_repeat 339 361
IPR002885 Pentatricopeptide_repeat 469 496
IPR002885 Pentatricopeptide_repeat 367 394
IPR002885 Pentatricopeptide_repeat 541 562
IPR002885 Pentatricopeptide_repeat 441 468
No external refs found!