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  5. Sobic.003G121400.1

Sobic.003G121400.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G121400.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
89924 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
A4A49_12086 No alias cyclic dof factor 2 0.04 Orthogroups_2024-Update
A4A49_24184 No alias dof zinc finger protein dof3.1 0.03 Orthogroups_2024-Update
At1g26790 No alias Dof-type zinc finger DNA-binding family protein... 0.03 Orthogroups_2024-Update
At1g64620 No alias Dof zinc finger protein DOF1.8... 0.03 Orthogroups_2024-Update
At1g69570 No alias Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] 0.04 Orthogroups_2024-Update
At3g47500 No alias Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3] 0.04 Orthogroups_2024-Update
At5g02460 No alias Dof zinc finger protein DOF5.1... 0.02 Orthogroups_2024-Update
At5g39660 No alias Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5] 0.04 Orthogroups_2024-Update
At5g62430 No alias Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3] 0.03 Orthogroups_2024-Update
Bradi1g17410 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Brara.C04204.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.G02891.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.H02152.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G089949 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
GRMZM2G134545 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.07G012100 No alias DOF zinc finger protein 1 0.03 Orthogroups_2024-Update
Glyma.10G082000 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.11G151497 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.15G071400 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.18G260500 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
HORVU2Hr1G017290.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU4Hr1G074990.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os01g15900 No alias expressed protein 0.05 Orthogroups_2024-Update
LOC_Os02g47810 No alias dof zinc finger domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_123810g0010 No alias (at5g60850 : 129.0) Encodes a zinc finger protein.; OBF... 0.02 Orthogroups_2024-Update
MA_97259g0020 No alias (at5g62430 : 134.0) Dof-type zinc finger... 0.02 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
PSME_00053408-RA No alias (at5g39660 : 183.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Pp1s267_24V6 No alias cycling dof factor 2 0.03 Orthogroups_2024-Update
Pp1s37_7V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Pp1s385_53V6 No alias ascorbate oxidase promoter-binding protein aobp 0.02 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.08 Orthogroups_2024-Update
Seita.6G192200.1 No alias transcription factor *(DOF) 0.11 Orthogroups_2024-Update
Sobic.001G034300.3 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.02 Orthogroups_2024-Update
Solyc02g077950 No alias Dof zinc finger protein5 0.03 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.03 Orthogroups_2024-Update
Solyc06g069760 No alias Dof zinc finger protein 22 0.02 Orthogroups_2024-Update
Solyc06g071480 No alias Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) 0.03 Orthogroups_2024-Update
Sopen02g015430 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen02g032780 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 182 239
No external refs found!