1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G129000.1

Sobic.003G129000.1


Description : MYB class-R2R3 subgroup-21 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G129000.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
A4A49_23394 No alias transcription factor myb44 0.03 Orthogroups_2024-Update
At2g23290 No alias At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179] 0.04 Orthogroups_2024-Update
Bradi1g30252 No alias myb domain protein r1 0.02 Orthogroups_2024-Update
Bradi2g55303 No alias myb domain protein 98 0.02 Orthogroups_2024-Update
Brara.A00456.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Brara.A03573.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
Brara.K00427.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G470307 No alias Homeodomain-like protein 0.02 Orthogroups_2024-Update
Glyma.04G036700 No alias myb domain protein 77 0.05 Orthogroups_2024-Update
Glyma.14G192600 No alias myb domain protein 64 0.02 Orthogroups_2024-Update
MA_89624g0010 No alias (at1g69560 : 166.0) Encodes LOF2 (LATERAL ORGAN... 0.02 Orthogroups_2024-Update
Potri.009G096000 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Pp1s10_267V6 No alias r2r3-myb transcription factor 0.04 Orthogroups_2024-Update
Solyc08g080580 No alias Myb (AHRD V3.3 *** Q948S4_TOBAC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 42 88
IPR001005 SANT/Myb 94 138
No external refs found!