Sobic.003G129300.1


Description : regulatory triphosphatase *(TTM) of Programmed Cell Death


Gene families : OG_42_0002669 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002669_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G129300.1
Cluster HCAA Clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G127400 No alias Phosphoribulokinase / Uridine kinase family 0.03 Orthogroups_2024-Update
Seita.1G291200.1 No alias regulatory triphosphatase *(TTM) of Programmed Cell Death 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016301 kinase activity IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
InterPro domains Description Start Stop
IPR023577 CYTH_domain 271 404
IPR006083 PRK/URK 67 236
No external refs found!