Sobic.003G129900.1


Description : EC_1.1 oxidoreductase acting on CH-OH group of donor & catalytic component of isocitrate dehydrogenase heterodimer


Gene families : OG_42_0001185 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001185_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G129900.1
Cluster HCAA Clusters: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G082800.1 No alias regulatory component of isocitrate dehydrogenase... 0.04 Orthogroups_2024-Update
LOC_Os01g16900 No alias dehydrogenase, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g26630.1 No alias catalytic component of isocitrate dehydrogenase heterodimer 0.02 Orthogroups_2024-Update
Seita.7G138200.1 No alias regulatory component of isocitrate dehydrogenase... 0.03 Orthogroups_2024-Update
Sobic.006G120900.1 No alias regulatory component of isocitrate dehydrogenase... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR024084 IsoPropMal-DH-like_dom 38 361
No external refs found!