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  5. Sobic.003G134300.1

Sobic.003G134300.1


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0002133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G134300.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
409561 No alias F-box family protein 0.03 Orthogroups_2024-Update
A4A49_22414 No alias f-box protein 0.04 Orthogroups_2024-Update
At2g32560 No alias F-box protein At2g32560 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY82] 0.02 Orthogroups_2024-Update
Brara.I05151.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Glyma.02G278300 No alias F-box family protein 0.04 Orthogroups_2024-Update
Glyma.03G126600 No alias F-box family protein 0.04 Orthogroups_2024-Update
Glyma.14G036300 No alias F-box family protein 0.05 Orthogroups_2024-Update
Glyma.19G129600 No alias F-box family protein 0.02 Orthogroups_2024-Update
LOC_Os01g17390 No alias OsFBX5 - F-box domain containing protein, expressed 0.04 Orthogroups_2024-Update
Potri.001G273900 No alias F-box family protein 0.06 Orthogroups_2024-Update
Potri.016G035900 No alias F-box family protein 0.03 Orthogroups_2024-Update
Seita.5G038400.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.12 Orthogroups_2024-Update
Solyc11g065000 No alias F-box family protein (AHRD V3.3 *** B9HNI4_POPTR) 0.07 Orthogroups_2024-Update
Sopen11g024770 No alias F-box domain 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 97 137
No external refs found!