Sobic.003G134800.1


Description : subunit beta of cargo adaptor F-subcomplex


Gene families : OG_42_0003181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003181_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G134800.1
Cluster HCAA Clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
A4A49_19463 No alias coatomer subunit beta-1 0.04 Orthogroups_2024-Update
Bradi2g10910 No alias Coatomer, beta subunit 0.05 Orthogroups_2024-Update
Bradi2g10950 No alias Coatomer, beta subunit 0.03 Orthogroups_2024-Update
Brara.A00624.1 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Orthogroups_2024-Update
Brara.K01651.1 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Orthogroups_2024-Update
Cre04.g217921 No alias Coatomer, beta subunit 0.05 Orthogroups_2024-Update
Glyma.08G222400 No alias Coatomer, beta subunit 0.02 Orthogroups_2024-Update
HORVU3Hr1G040350.1 No alias subunit beta of cargo adaptor F-subcomplex 0.05 Orthogroups_2024-Update
PSME_00008063-RA No alias (at4g31480 : 1445.0) Coatomer, beta subunit; FUNCTIONS... 0.05 Orthogroups_2024-Update
Pp1s168_28V6 No alias coatomer subunit beta 0.05 Orthogroups_2024-Update
Pp1s309_15V6 No alias coatomer subunit beta 0.04 Orthogroups_2024-Update
Pp1s42_100V6 No alias coatomer subunit beta 0.02 Orthogroups_2024-Update
Seita.5G038000.1 No alias subunit beta of cargo adaptor F-subcomplex 0.11 Orthogroups_2024-Update
Seita.5G398100.1 No alias subunit beta of cargo adaptor F-subcomplex 0.1 Orthogroups_2024-Update
evm.model.tig00020553.156 No alias (at4g31480 : 943.0) Coatomer, beta subunit; FUNCTIONS... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA 16Dec
BP GO:0006886 intracellular protein transport IEA 16Dec
BP GO:0016192 vesicle-mediated transport IEA 16Dec
CC GO:0030117 membrane coat IEA 16Dec
CC GO:0030126 COPI vesicle coat IEA 16Dec
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006897 endocytosis IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 21 470
IPR029446 COPB1_appendage_platform_dom 815 942
IPR011710 Coatomer_bsu_C 671 809
No external refs found!