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  5. Sobic.003G136600.1

Sobic.003G136600.1


Description : MYB class-R2R3 subgroup-13 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G136600.1
Cluster HCAA Clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Bradi2g46770 No alias myb domain protein 87 0.04 Orthogroups_2024-Update
Bradi4g38965 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
GRMZM2G147346 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Glyma.02G013900 No alias myb domain protein 12 0.04 Orthogroups_2024-Update
Glyma.10G014600 No alias myb domain protein 12 0.06 Orthogroups_2024-Update
Glyma.12G104500 No alias myb domain protein 14 0.04 Orthogroups_2024-Update
Glyma.12G237500 No alias myb domain protein 83 0.05 Orthogroups_2024-Update
Glyma.13G032200 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
PSME_00028312-RA No alias (at1g66230 : 243.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00053331-RA No alias (at3g61250 : 251.0) Member of the R2R3 factor gene... 0.07 Orthogroups_2024-Update
Potri.012G080400 No alias myb domain protein 66 0.04 Orthogroups_2024-Update
Seita.3G142100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G158000.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.04 Orthogroups_2024-Update
Seita.9G390800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Solyc06g065100 No alias R2R3MYB transcription factor 3 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 109
IPR001005 SANT/Myb 14 61
No external refs found!