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  5. At3g50700

At3g50700


Description : Protein indeterminate-domain 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCQ6]


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g50700
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
At4g02670 No alias Indeterminate(ID)-domain 12... 0.03 Orthogroups_2024-Update
Brara.B03087.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G176600 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.03G179700 No alias indeterminate(ID)-domain 4 0.02 Orthogroups_2024-Update
Glyma.08G056800 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.20G109400 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
Glyma.20G184000 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
PSME_00020819-RA No alias (at2g01940 : 340.0) May be involved in an early event in... 0.02 Orthogroups_2024-Update
Potri.006G129300 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Potri.006G227600 No alias indeterminate(ID)-domain 11 0.03 Orthogroups_2024-Update
Solyc06g062670 No alias zinc finger family protein 0.03 Orthogroups_2024-Update
Solyc06g075250 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.03 Orthogroups_2024-Update
Sopen04g033710 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update
Sopen06g022130 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen08g018610 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen10g033630 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 63 85
No external refs found!