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  5. Sobic.003G150600.1

Sobic.003G150600.1


Description : pectin acetylesterase *(PAE)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G150600.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
At4g19410 No alias Pectin acetylesterase [Source:UniProtKB/TrEMBL;Acc:F4JT64] 0.03 Orthogroups_2024-Update
Bradi2g12047 No alias Pectinacetylesterase family protein 0.04 Orthogroups_2024-Update
Bradi2g62426 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
Brara.A01037.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Brara.C03269.1 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update
Brara.H01015.1 No alias pectin acetylesterase *(PAE) 0.04 Orthogroups_2024-Update
Glyma.16G107300 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G114530.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
HORVU5Hr1G114540.3 No alias pectin acetylesterase *(PAE) 0.04 Orthogroups_2024-Update
LOC_Os01g66850 No alias pectinacetylesterase domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.9G333700.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Solyc08g075020 No alias Pectinacetylesterase family protein (AHRD V3.3 *** AT4G19420.2) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 81 435
No external refs found!