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  5. Sobic.003G150700.1

Sobic.003G150700.1


Description : pectin acetylesterase *(PAE)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G150700.1
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_34257 No alias pectin acetylesterase 8 0.03 Orthogroups_2024-Update
At1g09550 No alias Pectin acetylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:F4I107] 0.04 Orthogroups_2024-Update
At3g05910 No alias Pectin acetylesterase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF6] 0.03 Orthogroups_2024-Update
Bradi2g12047 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
Brara.B02825.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Brara.C03128.1 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update
Brara.G00285.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Brara.H01015.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
GRMZM6G220418 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
Glyma.01G151600 No alias Pectinacetylesterase family protein 0.02 Orthogroups_2024-Update
MA_10436630g0010 No alias (at3g05910 : 355.0) Pectinacetylesterase family protein;... 0.04 Orthogroups_2024-Update
PSME_00006550-RA No alias (at4g19420 : 301.0) Pectinacetylesterase family protein;... 0.03 Orthogroups_2024-Update
PSME_00015532-RA No alias (at4g19420 : 230.0) Pectinacetylesterase family protein;... 0.02 Orthogroups_2024-Update
PSME_00018609-RA No alias (at4g19420 : 395.0) Pectinacetylesterase family protein;... 0.03 Orthogroups_2024-Update
PSME_00035414-RA No alias (at3g05910 : 345.0) Pectinacetylesterase family protein;... 0.03 Orthogroups_2024-Update
Potri.013G000900 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
Pp1s136_39V6 No alias pectinacetylesterase protein 0.02 Orthogroups_2024-Update
Seita.1G287600.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Seita.2G404000.1 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update
Solyc03g025600 No alias Pectinacetylesterase family protein (AHRD V3.3 *** AT5G23870.3) 0.02 Orthogroups_2024-Update
Solyc08g075020 No alias Pectinacetylesterase family protein (AHRD V3.3 *** AT4G19420.2) 0.02 Orthogroups_2024-Update
Solyc10g086480 No alias Pectinacetylesterase family protein (AHRD V3.3 *** AT3G09410.1) 0.02 Orthogroups_2024-Update
Sopen01g044800 No alias Pectinacetylesterase 0.02 Orthogroups_2024-Update
Sopen08g001800 No alias Pectinacetylesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 48 399
No external refs found!