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  5. Sobic.003G153800.1

Sobic.003G153800.1


Description : alkaline sucrose-specific invertase *(CIN)


Gene families : OG_42_0001526 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G153800.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Bradi1g64150 No alias Plant neutral invertase family protein 0.03 Orthogroups_2024-Update
GRMZM2G084940 No alias Plant neutral invertase family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G072590.1 No alias alkaline sucrose-specific invertase *(CIN) 0.03 Orthogroups_2024-Update
LOC_Os01g22900 No alias neutral/alkaline invertase, putative, expressed 0.02 Orthogroups_2024-Update
Seita.5G157600.1 No alias alkaline sucrose-specific invertase *(CIN) 0.03 Orthogroups_2024-Update
Seita.9G425300.1 No alias alkaline sucrose-specific invertase *(CIN) 0.04 Orthogroups_2024-Update
Sopen01g044310 No alias Alkaline and neutral invertase 0.03 Orthogroups_2024-Update
Sopen11g003160 No alias Alkaline and neutral invertase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006361 transcription initiation from RNA polymerase I promoter IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016180 snRNA processing IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0034472 snRNA 3'-end processing IEP Predicted GO
BP GO:0034477 U6 snRNA 3'-end processing IEP Predicted GO
BP GO:0043628 ncRNA 3'-end processing IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:0140223 general transcription initiation factor activity IEP Predicted GO
InterPro domains Description Start Stop
IPR024746 Glyco_hydro_100 147 588
No external refs found!