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  5. Sobic.003G157200.1

Sobic.003G157200.1


Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha)


Gene families : OG_42_0000552 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000552_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G157200.1
Cluster HCAA Clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
A4A49_20819 No alias importin subunit alpha 0.04 Orthogroups_2024-Update
At5g49310 No alias Importin subunit alpha-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ09] 0.02 Orthogroups_2024-Update
evm.model.tig00021721.27 No alias (q71vm4|ima1a_orysa : 650.0) Importin alpha-1a subunit -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000225 Armadillo 168 207
IPR000225 Armadillo 209 246
IPR000225 Armadillo 253 290
IPR000225 Armadillo 128 163
IPR000225 Armadillo 95 119
IPR032413 Arm_3 306 358
No external refs found!