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  5. Sobic.003G160200.1

Sobic.003G160200.1


Description : subfamily ABCC transporter


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G160200.1
Cluster HCAA Clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
144775 No alias multidrug resistance-associated protein 5 0.03 Orthogroups_2024-Update
169678 No alias multidrug resistance-associated protein 6 0.04 Orthogroups_2024-Update
Bradi2g12727 No alias multidrug resistance-associated protein 4 0.03 Orthogroups_2024-Update
Brara.E00958.1 No alias glutathione S-conjugate transporter & subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Brara.G01873.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Brara.I02815.1 No alias glutathione S-conjugate transporter & subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Brara.I04064.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Brara.I04331.1 No alias subfamily ABCC transporter 0.04 Orthogroups_2024-Update
Glyma.07G011600 No alias multidrug resistance-associated protein 6 0.02 Orthogroups_2024-Update
Glyma.07G121900 No alias multidrug resistance-associated protein 9 0.03 Orthogroups_2024-Update
Glyma.08G190700 No alias multidrug resistance-associated protein 6 0.05 Orthogroups_2024-Update
Glyma.14G015300 No alias multidrug resistance-associated protein 3 0.03 Orthogroups_2024-Update
HORVU7Hr1G088210.25 No alias subfamily ABCC transporter 0.04 Orthogroups_2024-Update
LOC_Os04g49900 No alias ABC transporter family protein, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00043612-RA No alias (at2g47800 : 249.0) Encodes a plasma membrane localized... 0.02 Orthogroups_2024-Update
PSME_00044356-RA No alias (at3g62700 : 116.0) member of MRP subfamily; multidrug... 0.02 Orthogroups_2024-Update
Pp1s293_70V6 No alias multidrug resistance protein abc transporter family 0.02 Orthogroups_2024-Update
Pp1s540_4V6 No alias multidrug resistance protein abc transporter family 0.03 Orthogroups_2024-Update
Seita.7G216700.1 No alias subfamily ABCC transporter 0.06 Orthogroups_2024-Update
Solyc03g007530 No alias ABC transporter family protein (AHRD V3.3 *** U5FPJ5_POPTR) 0.02 Orthogroups_2024-Update
Sopen11g025460 No alias ABC transporter 0.03 Orthogroups_2024-Update
evm.model.tig00000718.2 No alias (at2g34660 : 171.0) encodes a multidrug... 0.02 Orthogroups_2024-Update
evm.model.tig00000718.3 No alias (at3g13090 : 182.0) member of MRP subfamily; multidrug... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 958 1196
IPR011527 ABC1_TM_dom 328 594
IPR003439 ABC_transporter-like 1287 1435
IPR003439 ABC_transporter-like 663 796
No external refs found!