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  5. Sobic.003G178500.1

Sobic.003G178500.1


Description : 3-ketoacyl-CoA synthase *(KCS)


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G178500.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Bradi1g44030 No alias 3-ketoacyl-CoA synthase 6 0.02 Orthogroups_2024-Update
Bradi2g15720 No alias 3-ketoacyl-CoA synthase 11 0.03 Orthogroups_2024-Update
Bradi3g07730 No alias 3-ketoacyl-CoA synthase 11 0.02 Orthogroups_2024-Update
Brara.C04403.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update
Brara.J00238.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
GRMZM2G164974 No alias 3-ketoacyl-CoA synthase 6 0.02 Orthogroups_2024-Update
Glyma.14G074300 No alias 3-ketoacyl-CoA synthase 4 0.03 Orthogroups_2024-Update
HORVU1Hr1G090730.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.05 Orthogroups_2024-Update
HORVU7Hr1G006910.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
PSME_00053389-RA No alias (at1g01120 : 560.0) Encodes a condensing enzyme KCS1... 0.02 Orthogroups_2024-Update
Potri.009G116700 No alias 3-ketoacyl-CoA synthase 4 0.02 Orthogroups_2024-Update
Pp1s21_102V6 No alias beta-ketoacyl-coa synthase family protein 0.01 Orthogroups_2024-Update
Pp1s30_335V6 No alias beta-ketoacyl-coa synthase family protein 0.03 Orthogroups_2024-Update
Pp1s34_294V6 No alias beta-ketoacyl-coa synthase family protein 0.04 Orthogroups_2024-Update
Pp1s8_88V6 No alias beta-ketoacyl- synthase 0.02 Orthogroups_2024-Update
Sobic.001G247700.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
Sobic.001G264500.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
Sopen05g005020 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update
Sopen06g019050 No alias FAE1/Type III polyketide synthase-like protein 0.06 Orthogroups_2024-Update
Sopen09g031930 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 381 462
IPR013601 FAE1_typ3_polyketide_synth 76 362
No external refs found!