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  5. Sobic.003G181600.1

Sobic.003G181600.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G181600.1
Cluster HCAA Clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
A4A49_29826 No alias csc1-like protein rxw8 0.02 Orthogroups_2024-Update
Brara.K00580.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
GRMZM2G456000 No alias ERD (early-responsive to dehydration stress) family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G060390.2 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
HORVU5Hr1G001670.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
MA_99251g0010 No alias (at1g30360 : 376.0) early-responsive to dehydration 4... 0.02 Orthogroups_2024-Update
Potri.001G358300 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Orthogroups_2024-Update
Potri.002G113800 No alias lipases;hydrolases, acting on ester bonds 0.02 Orthogroups_2024-Update
Potri.004G115800 No alias hypothetical protein 1 0.03 Orthogroups_2024-Update
Pp1s13_374V6 No alias early-responsive to dehydration erd 0.02 Orthogroups_2024-Update
Pp1s213_49V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
Solyc12g088230 No alias mitochondrial malate dehydrogenase 0.02 Orthogroups_2024-Update
Sopen02g011540 No alias Domain of unknown function DUF221 0.02 Orthogroups_2024-Update
Sopen08g024920 No alias Domain of unknown function DUF221 0.02 Orthogroups_2024-Update
evm.model.tig00000498.27 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 197 359
IPR032880 Csc1_N 7 176
IPR003864 RSN1_7TM 370 642
No external refs found!