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  5. Sobic.003G193700.1

Sobic.003G193700.1


Description : large subunit of carbamoyl phosphate synthetase heterodimer & large subunit of carbamoyl phosphate synthetase heterodimer & EC_6.3 ligase forming carbon-nitrogen bond


Gene families : OG_42_0003599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003599_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G193700.1
Cluster HCAA Clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
evm.model.contig_2050.17 No alias (at1g29900 : 664.0) carbamoyl phosphate synthetase large... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011607 MGS-like_dom 1039 1125
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 754 958
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 196 403
IPR005480 CarbamoylP_synth_lsu_oligo 495 572
No external refs found!