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  5. Sobic.003G195150.1

Sobic.003G195150.1


Description : bifunctional gamma-hydroxybutyrate dehydrogenase and glyoxylate reductase & EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG_42_0002564 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002564_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G195150.1
Cluster HCAA Clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
At1g17650 No alias Glyoxylate/succinic semialdehyde reductase 2,... 0.02 Orthogroups_2024-Update
Brara.F01242.1 No alias bifunctional gamma-hydroxybutyrate dehydrogenase and... 0.03 Orthogroups_2024-Update
GRMZM5G848696 No alias glyoxylate reductase 2 0.02 Orthogroups_2024-Update
Potri.003G040800 No alias glyoxylate reductase 2 0.05 Orthogroups_2024-Update
Seita.5G207800.1 No alias bifunctional gamma-hydroxybutyrate dehydrogenase and... 0.05 Orthogroups_2024-Update
Sopen03g040530 No alias NAD binding domain of 6-phosphogluconate dehydrogenase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0050661 NADP binding IEA 16Dec
MF GO:0051287 NAD binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006115 6PGDH_NADP-bd 43 202
IPR029154 NADP-bd 205 324
No external refs found!