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  5. Sobic.003G201500.1

Sobic.003G201500.1


Description : voltage-gated anion channel *(VDAC)


Gene families : OG_42_0000558 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000558_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G201500.1
Cluster HCAA Clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Glyma.17G064100 No alias voltage dependent anion channel 4 0.03 Orthogroups_2024-Update
Kfl00092_0280 kfl00092_0280_v1.... (p42054|vdac_pea : 248.0) Outer plastidial membrane... 0.02 Orthogroups_2024-Update
evm.model.contig_3391.2 No alias (p42056|vdac2_soltu : 90.5) 36 kDa outer mitochondrial... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 2 268
No external refs found!