Sobic.003G203800.1

Description : REM-type transcription factor

Gene families : OG_42_0001074 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001074_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.003G203800.1
Cluster	HCAA Clusters: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
A4A49_00209	No alias	putative b3 domain-containing protein	0.03	Orthogroups_2024-Update
At5g58280	No alias	AP2/B3-like transcriptional factor family protein...	0.02	Orthogroups_2024-Update
HORVU2Hr1G029110.2	No alias	REM-type transcription factor	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predicted GO
MF	GO:0004650	polygalacturonase activity	IEP	Predicted GO
CC	GO:0005739	mitochondrion	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
MF	GO:0050661	NADP binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	176	248

External Links

No external refs found!