1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G215400.2

Sobic.003G215400.2


Description : subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G215400.2
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
417263 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Bradi4g45397 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Seita.1G041000.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1192 1405
IPR013525 ABC_2_trans 522 733
IPR029481 ABC_trans_N 110 160
IPR003439 ABC_transporter-like 186 368
IPR003439 ABC_transporter-like 894 1046
IPR013581 PDR_assoc 739 804
No external refs found!