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  5. Sobic.003G215800.1

Sobic.003G215800.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G215800.1
Cluster HCAA Clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
115821 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Orthogroups_2024-Update
235359 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
415867 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
426328 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
441722 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
A4A49_09054 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_33262 No alias abc transporter g family member 32 0.03 Orthogroups_2024-Update
Bradi1g26040 No alias pleiotropic drug resistance 6 0.05 Orthogroups_2024-Update
Bradi1g38025 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Orthogroups_2024-Update
Bradi2g10110 No alias pleiotropic drug resistance 12 0.07 Orthogroups_2024-Update
Bradi2g43120 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
Brara.F01033.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Brara.F01034.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Brara.G01592.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Brara.G02000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Cre16.g655450 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
GRMZM2G003411 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
GRMZM2G118243 No alias pleiotropic drug resistance 4 0.03 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.03G168000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.04 Orthogroups_2024-Update
Glyma.04G069800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.13G355000 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Orthogroups_2024-Update
Glyma.14G127800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.15G019200 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Orthogroups_2024-Update
Glyma.18G063400 No alias pleiotropic drug resistance 3 0.03 Orthogroups_2024-Update
Glyma.19G169200 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.19G169400 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU5Hr1G124650.12 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
HORVU7Hr1G092510.2 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Kfl00056_0220 kfl00056_0220_v1.1 (q7pc80|pdr1_orysa : 1395.0) Probable pleiotropic drug... 0.02 Orthogroups_2024-Update
Kfl00175_0190 kfl00175_0190_v1.1 (at2g29940 : 809.0) pleiotropic drug resistance 3... 0.02 Orthogroups_2024-Update
Kfl00361_0030 kfl00361_0030_v1.1 (q5z9s8|pdr12_orysa : 1282.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
Kfl00616_0050 kfl00616_0050_v1.1 (at1g59870 : 1348.0) ATP binding cassette transporter.... 0.02 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g36090 No alias ABC-2 type transporter, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g43120 No alias Plant PDR ABC transporter associated domain containing... 0.03 Orthogroups_2024-Update
LOC_Os12g32820 No alias pleiotropic drug resistance protein 3, putative, expressed 0.02 Orthogroups_2024-Update
MA_10425791g0020 No alias (q8gu88|pdr7_orysa : 1086.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
MA_105476g0010 No alias (q2pcf1|pdr2_nicpl : 1910.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
MA_949447g0010 No alias (q8gu92|pdr2_orysa : 473.0) Probable pleiotropic drug... 0.03 Orthogroups_2024-Update
Mp2g07030.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00001270-RA No alias (at1g59870 : 760.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00001761-RA No alias (q5z9s8|pdr12_orysa : 1822.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00005403-RA No alias (q8gu88|pdr7_orysa : 1833.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00009192-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00009473-RA No alias (at2g26910 : 1773.0) pleiotropic drug resistance 4... 0.05 Orthogroups_2024-Update
PSME_00013320-RA No alias (q8gu88|pdr7_orysa : 1886.0) Putative pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.05 Orthogroups_2024-Update
PSME_00015316-RA No alias (q2pcf1|pdr2_nicpl : 1867.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.07 Orthogroups_2024-Update
Potri.001G048900 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Potri.001G049000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Potri.003G179000 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Potri.010G235800 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
Pp1s15_135V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Pp1s170_10V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Seita.2G152000.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.2G162400.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221700.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.001G190900.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.004G087800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc02g081870 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc03g120980 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc05g053600 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc09g091670 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc11g007280 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g098210 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g100190 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen11g003170 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen12g034810 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
evm.model.tig00021489.3 No alias (at3g21090 : 172.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 510 721
IPR013525 ABC_2_trans 1179 1393
IPR013581 PDR_assoc 727 791
IPR029481 ABC_trans_N 99 148
IPR003439 ABC_transporter-like 882 1034
IPR003439 ABC_transporter-like 174 356
No external refs found!