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  5. Sobic.003G216000.1

Sobic.003G216000.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G216000.1
Cluster HCAA Clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
235359 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
415867 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
426328 No alias pleiotropic drug resistance 6 0.03 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
99541 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_23886 No alias pleiotropic drug resistance protein 1 0.05 Orthogroups_2024-Update
At1g15520 No alias ABC transporter G family member 40... 0.03 Orthogroups_2024-Update
At2g36380 No alias ABC transporter G family member 34... 0.03 Orthogroups_2024-Update
Bradi1g26040 No alias pleiotropic drug resistance 6 0.06 Orthogroups_2024-Update
Bradi2g04847 No alias pleiotropic drug resistance 4 0.04 Orthogroups_2024-Update
Bradi2g10110 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
Bradi2g43120 No alias pleiotropic drug resistance 12 0.06 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Bradi3g34890 No alias pleiotropic drug resistance 12 0.06 Orthogroups_2024-Update
Brara.A03065.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.C02383.1 No alias abscisic acid transporter *(ABCG31) & subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.F01033.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.H02545.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.K01577.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
GRMZM2G451792 No alias pleiotropic drug resistance 7 0.03 Orthogroups_2024-Update
GRMZM2G477872 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
Glyma.03G168000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.03G168101 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.04 Orthogroups_2024-Update
Glyma.04G069800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.05G011900 No alias pleiotropic drug resistance 4 0.04 Orthogroups_2024-Update
Glyma.06G071800 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.07G033500 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.14G127800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.15G011900 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.20G187400 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
HORVU3Hr1G022800.1 No alias cuticular lipid exporter *(PEC1) & subfamily ABCG transporter 0.08 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.07 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU4Hr1G081040.4 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU7Hr1G092510.2 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os01g42380 No alias pleiotropic drug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g29570 No alias pleiotropic drug resistance protein 3, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g43120 No alias Plant PDR ABC transporter associated domain containing... 0.02 Orthogroups_2024-Update
LOC_Os09g16380 No alias pleiotropic drug resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10425791g0020 No alias (q8gu88|pdr7_orysa : 1086.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
MA_10426781g0010 No alias (at2g36380 : 1292.0) pleiotropic drug resistance 6... 0.04 Orthogroups_2024-Update
MA_10427561g0010 No alias (q8gu88|pdr7_orysa : 1276.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
MA_108793g0010 No alias (at1g59870 : 1600.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
MA_12965g0010 No alias (q949g3|pdr1_nicpl : 544.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
MA_135152g0010 No alias (q5z9s8|pdr12_orysa : 1938.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
MA_18770g0010 No alias (q8gu88|pdr7_orysa : 1809.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
MA_3894g0010 No alias (q76cu2|pdr1_tobac : 501.0) Pleiotropic drug resistance... 0.06 Orthogroups_2024-Update
MA_598099g0010 No alias (q5z9s8|pdr12_orysa : 976.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
Mp2g07030.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00001267-RA No alias (q5z9s8|pdr12_orysa : 1556.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00005403-RA No alias (q8gu88|pdr7_orysa : 1833.0) Putative pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00007073-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00009192-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00011269-RA No alias (q7fmw4|pdr15_orysa : 576.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00013320-RA No alias (q8gu88|pdr7_orysa : 1886.0) Putative pleiotropic drug... 0.05 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
Potri.001G048900 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Potri.010G153700 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Pp1s170_10V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Seita.1G041000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.2G162400.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.2G335300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G115400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G221300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221500.1 No alias subfamily ABCG transporter 0.07 Orthogroups_2024-Update
Seita.5G221700.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Seita.9G283100.1 No alias subfamily ABCG transporter 0.08 Orthogroups_2024-Update
Sobic.001G190900.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215300.2 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.004G087800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc05g053600 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc05g055330 No alias Drug resistance transporter-like ABC domain protein... 0.02 Orthogroups_2024-Update
Solyc06g065670 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc08g067620 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g067000 No alias Drug resistance transporter-like ABC domain protein... 0.06 Orthogroups_2024-Update
Solyc12g098210 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen06g033330 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 731 792
IPR003439 ABC_transporter-like 886 1038
IPR003439 ABC_transporter-like 178 360
IPR029481 ABC_trans_N 103 152
IPR013525 ABC_2_trans 514 725
IPR013525 ABC_2_trans 1183 1397
No external refs found!